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R Programming (Web-Published Since 2018)

R Basics

• R Training Files for Lab Members (2017) [Zip]
• Manual Installing R [Text]
• [WebBook] R을 이용한 자료분석. [Web]
• [Book] R for Beginners by Emmanuel Paradis (PDF) [PDF]
• R Objects. [web]

R Basics

• R: Basics - Vector, Matrix, Data Frame, List, Factor - by Eun Bae Kim (08/22/2018) [Web]
• R: Basics - Functions, Packages, Help - by Eun Bae Kim (08/22/2018) [Web]
• R: Basics - Data - Import and Export - by Eun Bae Kim (08/22/2018) [Web]
• R: Basics - Labeling, Missing Data, Filtering - by Eun Bae Kim (08/22/2018) [Web]

R Graphics

• R: Graph - Margin and Outer Margin - by Eun Bae Kim (11/30/2018) [Web]
• R: Graph - Layout, Margin, and Axis - by Eun Bae Kim (12/08/2018) [Web]
• R: Graph - Point and Line Types (pch and lty) - by Eun Bae Kim (12/08/2018) [Web]
• R: Graph - Colors Preparation - by Eun Bae Kim (12/08/2018) [Web]

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• R: Graph - Histogram - by Eun Bae Kim (11/30/2018) [Web]

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• R: Graph - Dot Plot - by Eun Bae Kim (11/30/2018) [Web]

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• R: Graph - BarPlot - by Eun Bae Kim (11/30/2018) [Web]
• R: Graph - Barplot with Error Bars 1 (ggplot2) - by Eun Bae Kim (12/08/2018) [Web]
• R: Graph - Barplot with Error Bars 2 (plot) - by Eun Bae Kim (12/08/2018) [Web]

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• R: Graph - Line Chart - by Eun Bae Kim (11/30/2018) [Web]

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• R: Graph - Pie Chart - by Eun Bae Kim (11/30/2018) [Web]
• R: Graph - Pie Chart, Bar Plot, and Chi-Square - by Eun Bae Kim (12/08/2018) [Web]

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• R: Graph - Box Plot - by Eun Bae Kim (11/30/2018) [Web]

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• R: Graph - Venn diagram - by Jongbin Park (01/08/2019) [Web]

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• R: Graph - Scatter Plot (2D, Correlation Matrix, Density, 3D) - by Eun Bae Kim (12/01/2018) [Web]

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• R: Graph - Heatmap and Dendrogram - by Eun Bae Kim (12/08/2018) [Web]
• R: Graph - Heatmap - by EBKim (10/01/2024) [Zip]
• R: Graph - Heatmap with Values - by EBKim (10/04/2024) [Zip]

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• R: Graph - Dendrogram - by Eun Bae Kim (12/08/2018) [Web]

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• R: Graph - Line/Curve Function 1 - by Eun Bae Kim (11/25/2018) [Web]
• R: Graph - Line/Curve Function 2 - by Eun Bae Kim (12/08/2018) [Web]

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• R: Graph - Circle Equations - by Eun Bae Kim (11/30/2018) [Web]

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• R: Graph - Ecology Analysis - NMDS - by Jongbin Park (01/10/2019) [Web]
• R: Graph - BURRITO: Function and Taxon relationship visualizer - by Jongbin Park (09/16/2019) [Web]

Statistics

• R: Statistics - Student's t-Test - by Eun Bae Kim (12/01/2018) [Web]

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• R: Statistics - ANOVA & Multiple Comparison - by Eun Bae Kim (12/01/2018) [Web]
• R: Statistics - ANOVA (Tukey, Duncan) with Charts - by Eun Bae Kim (12/01/2018) [Web]

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• R: Statistics - Chi-Squared Distribution - by Eun Bae Kim (07/05/2018) [Web]
• R: Statistics - Chi-Squared Test and Fisher's Exact Test - by Eun Bae Kim (12/01/2018) [Web]

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• R: Statistics - Likelihood-Ratio Test (LRT) - by Eun Bae Kim (07/05/2018) [Web]

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• R: Statistics - Regression with a Graph - by Eun Bae Kim (12/01/2018) [Web]
• R: Statistics - Correlation Matrix - by Eun Bae Kim (12/08/2018) [Web]

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• R: Statistics - PCA (Principal Component Analysis), Biplot, Cluster Rotation - by Eun Bae Kim (12/01/2018) [Web]
• R: Statistics - PCA and Biplot - by Eun Bae Kim (12/01/2018) [Web]

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• R: Statistics - Normal/Poison Distribution, Random Sampling - by Eun Bae Kim (11/30/2018) [Web]
• R: Statistics - Number of Cases (Combination) - Hand Shaking - by Eun Bae Kim (11/30/2018) [Web]

Text Mining

• R: Text Mining - PubMed Medline - Downloading Abstracts - by Eun Bae Kim (08/22/2018) [Web]
• R: Text Mining - Text File - Corpus, Wordcloud - by Eun Bae Kim (08/22/2018) [Web]
• R: Text Mining - Text File - Corpus, Wordcloud (Advanced) - by Eun Bae Kim (08/22/2018) [Web]

Table Handling & Database

• R: Table Handling - SQLite Basics - by Eun Bae Kim (08/22/2018) [Web]
• R: Table Handling - data.frame, data.table, SQLite (Advanced) - by Eun Bae Kim (08/22/2018) [Web]

External Packages

• R: Hierarchical Clustering with P Values (pvclust) [Web] [Web Manual PDF] [Concept PDF]